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Electronic Lab Notebooks: A Complete Guide for Modern Research

In 2026, the physical lab notebook is rapidly becoming a relic as global data integrity mandates accelerate the shift toward Electronic Lab Notebooks. Laboratories are now required to maintain accurate, traceable, and audit-ready records, making digital documentation essential.

A truly digital lab relies on two key elements: a robust ELN system to securely store and manage experimental data, and a versatile PDF architect like UPDF to refine, annotate, and share that information. Before diving into the ELN reviews, you can download UPDF for a free trial to see how it can instantly digitize your legacy paper notes via OCR and support electronic lab notebook workflows.

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Part 1. Top 4 Electronic Lab Notebooks for 2026

Choosing the right ELN is about matching your lab's specific "Data DNA" with the right solution. Based on user feedback and industry compliance standards in 2026, these four platforms stand out:

1. Benchling 

Benchling remains the industry leader for biotech and molecular biology. It's not just a notebook; it's a unified R&D platform that integrates DNA/RNA design tools directly into your experimental entries.

  • Best For: Fast-moving biotech startups and data-intensive molecular research.
  • Key Advantage: Seamless synchronization between biological sequences and experimental results.
benchling electronic lab notebook

2. eLabFTW 

For labs that value transparency and control, eLabFTW offers a powerful open-source electronic lab notebook option. It enables experiment tracking, timestamping, and inventory management while allowing self-hosting for full data ownership. This flexibility makes it especially appealing to academic groups and research teams with strict privacy or budget constraints.

  • Best For: Academic groups and research teams with strict privacy or budget constraints.
  • Key Advantage: Completely free, highly customizable, and community-driven.
electronic lab notebook elabftw

3. LabArchives 

LabArchives is often considered the gold standard for academic institutions and teaching labs. It integrates seamlessly with learning platforms like Canvas and supports NIH data compliance, making it ideal for funded research environments. By reinforcing Electronic Lab Notebook best practices, LabArchives helps students and researchers maintain consistent documentation, collaboration, and long-term data integrity.

  • Best For: Universities, teaching labs, and federally funded researchers.
  • Key Advantage: Robust audit trails and easy "sharing" protocols for peer review.
labarchives electronic lab notebooks

4. SciSure ELN 

For compliance-driven and inventory-heavy workflows, SciSure ELN is designed to meet the demands of regulated laboratories. Its built-in support for FDA requirements, SOP enforcement, and audit readiness pairs seamlessly with inventory tracking. This ability makes it a strong fit for quality-focused research teams.

  • Best For: Regulated pharmaceutical labs and quality-control (QC) environments.
  • Key Advantage: Built-in "Audit-Ready" features that simplify regulatory inspections.
electronic lab notebook scisure eln

Side-by-Side Comparison: How Leading ELNs Compare at a Glance

The comparison table below offers a quick, scannable view of how top ELN platforms differ in different functionalities, helping you align the right tool with your lab's real-world needs:

ToolTarget DisciplinePricing TierKey Strength
BenchlingLife sciences, biotech, molecular biologyCustomizedUnified R&D platform with advanced DNA, RNA, and protein tools
eLabFTWAcademic research, small labs, open-source usersFreeOpen-source, self-hosted control with built-in compliance features
LabArchivesAcademic institutions, teaching labsProfessionalAcademic:$330/year
Corporate:$575/year
ELN + InventoryAcademic:$360/year
Corporate: $675/year
Strong academic adoption, Canvas integration, NIH compliance
SciSure ELNRegulated labs, pharma, biotechCustomizedFDA-focused compliance, SOP enforcement, and inventory integration

Part 2. The Workflow Synergy: Why ELNs and UPDF are Better Together

Modern laboratories increasingly rely on Electronic Lab Notebooks (ELNs) to manage complex experiments, enforce compliance, and support collaboration across research teams. While ELNs excel at capturing and organizing data, they don't always provide all the tools needed to finalize, polish, and share documents efficiently. This is where a versatile and budget-friendly PDF solution like UPDF seamlessly complements an ELN, creating a complete digital research workflow.

Features like OCR for digitizing legacy notes, annotation tools, and multi-document merging allow researchers to convert raw ELN data into professional, shareable reports efficiently. Beyond formatting, UPDF strengthens collaboration and security. Teams can annotate PDFs, highlight findings, and circulate documents without losing integrity, while password protection and redaction maintain confidentiality. For larger labs, UPDF's enterprise plans offer centralized management, licensing, and integration capabilities, seamlessly complementing ELNs.

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Streamlined Research Workflow With UPDF

To maximize efficiency in modern laboratories, combining electronic lab notebooks (ELNs) with UPDF creates a seamless, end-to-end digital workflow. Here's a step-by-step breakdown of how they complement each other:

1. Digitizing Legacy Notes

UPDF's OCR capabilities allow researchers to convert handwritten or scanned paper notes into searchable digital documents. This ensures that past research aligns with modern ELN records and is fully integrated into the digital workflow. Follow the steps mentioned below to learn how to perform the OCR on PDFs:

Step 1. Access OCR Feature

After you have accessed the tool within your device and imported the document to the tool, make it searchable by clicking on the  "Tools" option and selecting "OCR."

access updf ocr feature
Step 2. Select Mode and Convert

In the following interface, choose the mode of text recognition from the options provided. Now, select the "Document Language" and "Page Range" and hit the "Convert" button to make the document searchable.

choose moe and convert

2. Polishing the Export

ELN report exports often come out disorganized, with inconsistent formatting or incomplete sections. UPDF's Text Editing feature allows researchers to clean up these exports and correct formatting issues. Read the steps provided next to transform raw ELN data into polished, presentation-ready reports:

Step 1. Acquire Edit Feature

Once the file becomes editable, head to the "Tools" option again and click on the "Edit" section.

access updf edit feature
Step 2. Choose the Editing Option and Edit

From the floating toolbar above the page, choose the editing option, such as edit text, image, or even a link. To edit text, press the "Edit Text" icon located on the toolbar. Now select the text and make changes to it according to your preferences. You can access the panel on the right, change the alignment, and perform other text customization.

edit and polish text

3. Secure Certification

When preparing documents for patent filings or regulatory submissions, ensuring authenticity is critical. UPDF's Digital Signature feature allows researchers to add a legally binding timestamp to exported lab records, verifying authorship and integrity. Here is how you can add a Digital Signature to your report using UPDF:

Step 1. Acquire Form Feature

Head to the "Tools" option and locate the "Form" section to click on it. Now, find the "Digital Signature" option on the floating toolbar above the page and click on it. Place the signature field on the page wherever you want and press the "Close" icon.

choose updf form feature
Step 2. Sign the Document

Next, click on the added signature field to open a small window. Here, select the signature ID or create a new one if you have no IDs already added. Press the "Sign" button and input the password to sign the document.

add digital signature to document
Step 3. Review the Applied Digital Signature

As soon as you input the password, the copy of the document with the applied signature will be saved. Review the added signature within the document and proceed further.

save and review applied signature

4. AI Research Assistant

UPDF AI can quickly analyze and summarize lengthy reference papers linked in your ELN entries. By condensing complex research into clear, digestible summaries, it saves hours of manual reading, helping researchers extract key insights faster and stay focused on experiments and data analysis. To learn how to summarize a PDF, read the steps provided next:

Step 1. Access UPDF AI

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Once the document is fully opened within the tool, head to the right corner and click on the "UPDF AI" icon. Now, from the toolbar on the right, press the "Summarize" icon and select the lengthy text from the document to copy and paste within the chat field. Once done, hit the "Send" icon to let the tool generate the summary.

choose updf ai feature
Step 2. Copy the Generated Summary

After the summary is successfully generated, press the "Copy" icon to copy it to the clipboard and then paste it wherever you want, according to your choice.

copy generated summary by tool

Frequently Asked Questions

Q1. What is an electronic lab notebook?

An electronic lab notebook is a digital platform used to record, organize, and store experimental data securely. It replaces paper notebooks with searchable, shareable, and audit-ready documentation.

Q2. Why use an ELN instead of paper?

ELNs protect research data through cloud backups and access controls, reducing the risk of loss from fire, spills, or misplacement. Paper notebooks, once damaged or lost, cannot be recovered or easily duplicated.

Q3. Can I use ELNs for patent applications?

Yes, ELNs can support patent applications if they comply with regulations such as 21 CFR Part 11. Features like audit trails, timestamps, and electronic signatures help establish data authenticity and ownership.

Q4. Do I need a PDF editor if I have an ELN?

Yes, a PDF editor is essential for polishing final reports, applying OCR to scanned legacy notes, and merging multiple documents. ELNs capture data, while PDF tools prepare it for sharing, review, and submission.

Conclusion

All in all, this article provided a clear overview of how Electronic Lab Notebooks are transforming research documentation across industries. From academic labs to regulated biotech environments, choosing the right ELN improves accuracy, compliance, and collaboration. To complete a digital workflow, tools like UPDF add value by refining reports, applying OCR to legacy notes, and securely sharing polished research documents.

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